The detailed information of tRNA gene sequence


Sequence ID>WENV170201023
Genome IDCEPP01047446
Search identical group
Phylum/Class[CEPP] marine metagenome genome assembly TARA_042_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 511
End posion on genome 435
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tctccaccaa
tRNA gene sequence 
GGGCGGCTAGCTCAGTTGGTTAGAGCAGTTGTTTTACACGCATCAGGTCGGGAGTTCGAA
TCTCTCGCCGCCCACCA
Downstream region at tRNA end position 
taaaaacttt
Secondary structure (Cloverleaf model)
>WENV170201023	Val	TAC
                   a      ACCA taaaaacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    T + G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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