The detailed information of tRNA gene sequence


Sequence ID>WENV170201183
Genome IDCEPQ01001259
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2124
End posion on genome 2048
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatagtttgt
tRNA gene sequence 
GGCTGGGTAGCTCAGATGGTTAGAGCACTGGATTCATAAACCAGAGGTCGGCAGTTCGAT
TCTGCCTCCAGCTACCA
Downstream region at tRNA end position 
aataaaatat
Secondary structure (Cloverleaf model)
>WENV170201183	Met	CAT
                   t      ACCA aataaaatat
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G + T          T T
                    T     C C G T C     A
      A G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A   A
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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