The detailed information of tRNA gene sequence


Sequence ID>WENV170201202
Genome IDCEPQ01002121
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1378
End posion on genome 1302
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
taccccgcgc
tRNA gene sequence 
AGGGCAGTAACTCAGTAGGTCAGAGTAGCGTTCTTATAAAGCGCCGGTCGCGGGTTCAAG
TCCCGCCTGCCCTACCA
Downstream region at tRNA end position 
atatttaagg
Secondary structure (Cloverleaf model)
>WENV170201202	Ile	TAT
                   c      ACCA atatttaagg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | | | | |     A
    A       C T C A       G C G G G     C
    G       | | | |                 T T
    G       G A G T
      T C A        A     CGGTC
                    G - C
                    C - G
                    G - C
                    T + G
                    T - A
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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