The detailed information of tRNA gene sequence


Sequence ID>WENV170201242
Genome IDCEPQ01004687
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 61780
End posion on genome 61869
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgcccggac
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCGCACTCGAAATGCGGCGTGGGTGCAAGCTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcgtcgtcct
Secondary structure (Cloverleaf model)
>WENV170201242	Ser	CGA
                   c      GCCA gcgtcgtcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTGGGTGCAAGCTCACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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