The detailed information of tRNA gene sequence


Sequence ID>WENV170201393
Genome IDCEPQ01017007
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1911
End posion on genome 2002
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggaggataat
tRNA gene sequence 
GGAGAGGTGGCAGAGTCTGGCTTATTGCGTCGGTCTTGAAAACCGAAGATCATGAAAGTG
GTCCGTGGGTTCAAATCCTACCCTCTCCGCCA
Downstream region at tRNA end position 
atttaaggaa
Secondary structure (Cloverleaf model)
>WENV170201393	Ser	TGA
                   t      GCCA atttaaggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A T C C     A
    C T G A        G      | | + | |     A
  T         G A C G       G T G G G     C
  G         + | | |                 T T
  G         T T G C
    C T T A        G     AGATCATGAAAGTGGTCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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