The detailed information of tRNA gene sequence


Sequence ID>WENV170201502
Genome IDCEPQ01026513
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5
End posion on genome 92
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnntcgc
tRNA gene sequence 
GGAGGATTGGCTGAGTGGTCGAAAGCGGTGGTTTTGAAAACCATTGACCTTAACGGGTCC
GCAGGTTCGAATCCTGTGTCCTCCGCCA
Downstream region at tRNA end position 
tcttttttat
Secondary structure (Cloverleaf model)
>WENV170201502	Ser	TGA
                   c      GCCA tcttttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T + G          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGACCTTAACGGGTCC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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