The detailed information of tRNA gene sequence


Sequence ID>WENV170201535
Genome IDCEPQ01029994
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 169
End posion on genome 245
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tctccgctac
tRNA gene sequence 
GGTCTGGTAGTTCAGCTGGTTAGAATATCCGCCTGTCACGCGGAAGGTCGCGAGTTCGAG
TCTCGTCCAGACCGCTA
Downstream region at tRNA end position 
aaagtttaaa
Secondary structure (Cloverleaf model)
>WENV170201535	Asp	GTC
                   c      GCTA aaagtttaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C T C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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