The detailed information of tRNA gene sequence


Sequence ID>WENV170202188
Genome IDCEPQ01127190
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1264
End posion on genome 1182
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaagaacac
tRNA gene sequence 
GGAGGGTACTACGGCATGGGCTGTAATTCGGTTTGAACCCGAAGGCGATCTAACGGTTGG
GGGTTCGATTCCTCTACCCTCCTttt
Downstream region at tRNA end position 
atggtgtacg
Secondary structure (Cloverleaf model)
>WENV170202188	Ser	TGA
                   c      Tttt atggtgtacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    A     T C T C C     A
      A C G        C      + | + | |     G
    T       G C A T       G G G G G     C
    G       + | | |                 T T
    G       T G T A
      G C          A     GGCGATCTAACGGTT
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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