The detailed information of tRNA gene sequence


Sequence ID>WENV170202243
Genome IDCEPQ01130622
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 32259
End posion on genome 32332
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtaaccaaaT
tRNA gene sequence 
GAGCTTATAGTTCAAGGGTAGAACGTTCCACTCATAATGGAAAAGTTGTAGGTTCAAATC
CTACTGAGCTTAGgg
Downstream region at tRNA end position 
ttttttttag
Secondary structure (Cloverleaf model)
>WENV170202243	Met	CAT
                   T      AGgg ttttttttag
                     G + T
                     A - T
                     G - C
                     C - G
                     T - A
                     T + G
                     A - T          T A
                    T     C A T C C     A
        A A        A      | | | | |     A
      G     C T T G       G T A G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     AAGTT
                    T - A
                    T - A
                    C - G
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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