The detailed information of tRNA gene sequence


Sequence ID>WENV170202250
Genome IDCEPQ01130622
Search identical group
Phylum/Class[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 43555
End posion on genome 43629
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtgtgtatT
tRNA gene sequence 
CGCGGGATAGGGTAGTGGTTAGCCCATCGGGCTCATGACCCGGGAATTGTTGGTTCGAAT
CCAGCTCCCGCTAAta
Downstream region at tRNA end position 
attattcttt
Secondary structure (Cloverleaf model)
>WENV170202250	Met	CAT
                   T      AAta attattcttt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        A      | + | | |     G
    G       T G G G       G T T G G     C
    G       + | | |                 T T
    T       G C C C
      T A          A     GAATT
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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