The detailed information of tRNA gene sequence


Sequence ID>WENV170203097
Genome IDCEPS01023263
Search identical group
Phylum/Class[CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 152
End posion on genome 63
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatttattgt
tRNA gene sequence 
GGACAGGTGTCAGAGTGGTCGATTGTGCATCCTTGGAAAGGATGTGTTCTAGCAATAGAA
CCGGGAGTTCGAATCTCCCCCTGTCCGCCA
Downstream region at tRNA end position 
ttttttttgg
Secondary structure (Cloverleaf model)
>WENV170203097	Ser	GGA
                   t      GCCA ttttttttgg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C T       G G G A G     C
    G       + | |                   T T
    T       T T G T
      C G A        G     TGTTCTAGCAATAGAACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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