The detailed information of tRNA gene sequence


Sequence ID>WENV170205511
Genome IDCEPT01094478
Search identical group
Phylum/Class[CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 554
End posion on genome 478
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnncgt
tRNA gene sequence 
CGGAGTGTAGCGCAGCCTGGTAGCGCACTATACTGGGGGTGTAGGGGTCGTGGGTTCAAA
TCCCGCCGCTCCGACCA
Downstream region at tRNA end position 
ataaaaaccc
Secondary structure (Cloverleaf model)
>WENV170205511	Pro	GGG
                   t      ACCA ataaaaaccc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     A
    C       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    T + G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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