The detailed information of tRNA gene sequence


Sequence ID>WENV170208422
Genome IDCEPU01284066
Search identical group
Phylum/Class[CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 190
End posion on genome 266
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcccttgga
tRNA gene sequence 
GGGCCAGTAGCTCAGTTGGTTAGAGCAGTCCGCTCATAACGGATTGGTCGCTGGTTCAAG
TCCGGCCTGGCCCACCA
Downstream region at tRNA end position 
tccttagttc
Secondary structure (Cloverleaf model)
>WENV170208422	Met	CAT
                   a      ACCA tccttagttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T G A        A      | | + | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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