The detailed information of tRNA gene sequence


Sequence ID>WENV170208456
Genome IDCEPU01289362
Search identical group
Phylum/Class[CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2198
End posion on genome 2273
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatattgag
tRNA gene sequence 
AGCGACGTGGCGCAGTGGCTAGCGTGCCGCGCTCATAACGCGGAGGTCGGTGGATCGAAA
CCACCCGTCGCTATCA
Downstream region at tRNA end position 
aagataattt
Secondary structure (Cloverleaf model)
>WENV170208456	Met	CAT
                   g      ATCA aagataattt
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          A A
                    T     C C A C C     A
      T G A        G      | | | | |     G
    G       C G C G       G G T G G     C
    G       | | | +                 A T
    C       G C G T
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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