The detailed information of tRNA gene sequence


Sequence ID>WENV170208481
Genome IDCEPV01000559
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 129
End posion on genome 43
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttttatac
tRNA gene sequence 
AGCGGAGTAGGGCAGTCAGGAGTGCCCGGAGGGCTCATAAGCATTTGTGAAACCCTCAGG
TCAGTGGTTCAAATCCACTCTCCGCTAttt
Downstream region at tRNA end position 
tttcttttca
Secondary structure (Cloverleaf model)
>WENV170208481	Met	CAT
                   c      Attt tttcttttca
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C A C C     A
    C T G A        A      | | | | |     A
  A         C G G G       A G T G G     C
  G         | | | |                 T T
  G         G C C C
    A G T          G     TGTGAAACCCTCAGGTC
                    G + T
                    A - T
                    G   A
                    G - C
                    G   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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