The detailed information of tRNA gene sequence


Sequence ID>WENV170209007
Genome IDCEPV01026601
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 362
End posion on genome 273
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attagcttca
tRNA gene sequence 
GGAGGGGTGACCGAGAGGCCGATGGTGACGGTCTTGAAAACCGTTGTCTCCGCAAGGGGA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ccaagcttac
Secondary structure (Cloverleaf model)
>WENV170209007	Ser	TGA
                   a      GCCA ccaagcttac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTCTCCGCAAGGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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