The detailed information of tRNA gene sequence


Sequence ID>WENV170209231
Genome IDCEPV01042833
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1164
End posion on genome 1240
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tggttagcaa
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTAGCATGGGGTGCTAGTGGTCGCAGGTTCAAA
TCCTGCCGTCCCGACCA
Downstream region at tRNA end position 
aaaattagaa
Secondary structure (Cloverleaf model)
>WENV170209231	Pro	GGG
                   a      ACCA aaaattagaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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