The detailed information of tRNA gene sequence


Sequence ID>WENV170210277
Genome IDCEPV01178063
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 300
End posion on genome 394
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gaggataatt
tRNA gene sequence 
GGAGGCGGATAGGTGCTGGTGTGCCTGCTGGACTTCAAATCCAGTCTGTCCCGGTTTCCG
GGATAGGTAGGTTCGATTCCTACACGCCTCCGCCA
Downstream region at tRNA end position 
gtaaaataag
Secondary structure (Cloverleaf model)
>WENV170210277	SeC(p)	TCA
                   t      GCCA gtaaaataag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C A T C C     A
      T C G        T      | | | | |     G
    G       T G G A       G T A G G     C
    G       + | | |                 T T
    T       G C C T
      G T          G     TCTGTCCCGGTTTCCGGGATAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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