The detailed information of tRNA gene sequence


Sequence ID>WENV170210430
Genome IDCEPV01203895
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 964
End posion on genome 880
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctaaactttt
tRNA gene sequence 
GCAGAGGTCGCATAATTCGGTATTGCGCTCGCCTCGAAAGCGAGTCCCTCTGGGATTGCA
GGTTCAAATCCTGTCCTCTGCGCTA
Downstream region at tRNA end position 
tcctttccac
Secondary structure (Cloverleaf model)
>WENV170210430	Ser	CGA
                   t      GCTA tcctttccac
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T A A        C      + | | | |     A
    T       T A C G       G C A G G     C
    C         | | |                 T T
    G       T T G C
      G T A        G     TCCCTCTGGGATT
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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