The detailed information of tRNA gene sequence


Sequence ID>WENV170210757
Genome IDCEPW01011176
Search identical group
Phylum/Class[CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 139
End posion on genome 67
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aacttatttg
tRNA gene sequence 
GGGGGTATAGCTCAGTGGTAGAGCGATCGGCTGCAGTCCGATTGGTCCCCTGTTCAATCC
AGGGTGCCCCCTCag
Downstream region at tRNA end position 
gggtcgtagc
Secondary structure (Cloverleaf model)
>WENV170210757	Cys	GCA
                   g      TCag gggtcgtagc
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C T
                    T     G G G A C     A
        G A        A      | | | | |     A
      T     C T C G       C C C T G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       T
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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