The detailed information of tRNA gene sequence


Sequence ID>WENV170211243
Genome IDCEPW01051110
Search identical group
Phylum/Class[CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 220
End posion on genome 122
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atgaattgac
tRNA gene sequence 
GGAGATGGATGCGTCACTGGTGGGCGCCCCGGTCTTCAAAACCGTGTGTGTGGCACTAAT
CCTGTCACAGGTGGGTTCGATTCCTACACATCTCCGCCA
Downstream region at tRNA end position 
ctttatttga
Secondary structure (Cloverleaf model)
>WENV170211243	SeC(p)	TCA
                   c      GCCA ctttatttga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C
                     G   A          T T
                    A     C A T C C     A
      C A C        T      | | + | |     G
    T       T G C G       G T G G G     C
    G       + | | |                 T T
    G       G C G C
      T G G        C     GTGTGTGGCACTAATCCTGTCACAG
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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