The detailed information of tRNA gene sequence


Sequence ID>WENV170212419
Genome IDCEPW01177458
Search identical group
Phylum/Class[CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 174
End posion on genome 265
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attttttaat
tRNA gene sequence 
GGTAAGATGGTAGAGTCAGGTTTATTACGCTTCCCTGCTAAGGAAGTATGCCCTAAAAAG
CATCGTGGGTTCAAATCCCACTCTTACCGCCA
Downstream region at tRNA end position 
atttttttta
Secondary structure (Cloverleaf model)
>WENV170212419	Ser	GCT
                   t      GCCA atttttttta
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  A         G A T G       G T G G G     C
  G         + | | |                 T T
  G         T T A C
    T T T A        G     TATGCCCTAAAAAGCATC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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