The detailed information of tRNA gene sequence


Sequence ID>WENV170212765
Genome IDCEPW01287209
Search identical group
Phylum/Class[CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 280
End posion on genome 354
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaccgcttac
tRNA gene sequence 
AGGTCATTAGTGTTAGCGGTAGCACGACAGACTCCAAATCTGTTAGCAGGCGTTCGAATC
GTCTATGGCCTGCCA
Downstream region at tRNA end position 
tttacttgac
Secondary structure (Cloverleaf model)
>WENV170212765	Trp	CCA
                   c      GCCA tttacttgac
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     T - A          T A
                    T     T C T G C     A
      G A T        A      | | + | |     G
    C       T G T G       A G G C G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     TAGC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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