The detailed information of tRNA gene sequence


Sequence ID>WENV170213927
Genome IDCEPX01058314
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 273
End posion on genome 197
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgttcgtgc
tRNA gene sequence 
TGCGGTGTGGAGCAGTCCGGTAGCTCGTCAAGCTCATAATCTGAAGACCACGGGTTCAAA
TCCCGTCACCGCTACCA
Downstream region at tRNA end position 
ccgttctctg
Secondary structure (Cloverleaf model)
>WENV170213927	Met	CAT
                   c      ACCA ccgttctctg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        G      | | | | |     A
    C       C G A G       A C G G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGACC
                    T - A
                    C - G
                    A - T
                    A   C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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