The detailed information of tRNA gene sequence


Sequence ID>WENV170214291
Genome IDCEPX01075507
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 548
End posion on genome 622
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttagactact
tRNA gene sequence 
GACCTTGTAGCTCAATTGGCTAGAGTTCCGGATTGTCTATCCGGCGGTTGCGGGTTCGAG
TCCCGTCAAGGTCGCtt
Downstream region at tRNA end position 
gacaaactaa
Secondary structure (Cloverleaf model)
>WENV170214291	Asp	GTC
                   t      GCtt gacaaactaa
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      C T A        T     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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