The detailed information of tRNA gene sequence


Sequence ID>WENV170214837
Genome IDCEPX01112742
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5693
End posion on genome 5608
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaggcaacat
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGCAATGCAGCAGTTTGCTAAACTGTAGATGGTAAAACATCCCT
GGGTTCGAGTCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
aaaataaaat
Secondary structure (Cloverleaf model)
>WENV170214837	Ser	GCT
                   t      GCCA aaaataaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G A C C C     A
        G A        G      | | | | |     G
      C     G A C G       C T G G G     C
      G       | | |                 T T
      G     A T G C
        C A        A     AGATGGTAAAACATCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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