The detailed information of tRNA gene sequence


Sequence ID>WENV170215232
Genome IDCEPX01136958
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 296
End posion on genome 223
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagtgtttaa
tRNA gene sequence 
GGCACCGTAGTTTAGTTTGGTAGAACCCCAGTCTCATGAGCTGGTGATCCCCGGTTCAAA
TCCGGGCGGTGCCAttc
Downstream region at tRNA end position 
aatcattatc
Secondary structure (Cloverleaf model)
>WENV170215232	Met	CAT
                   a      Attc aatcattatc
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      T G A        A      | | | | |     A
    T       T T T G       C C C G G     C
    T       + | | |                 T T
    G       G A A C
      G T A        C     TGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    T + G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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