The detailed information of tRNA gene sequence


Sequence ID>WENV170215257
Genome IDCEPX01139863
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 275
End posion on genome 201
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatgaattat
tRNA gene sequence 
GGGCGAGTACCCAAGAGGACTAAGGGGACGGATTGCAAATCCGTTATTTCACAGGTTCGA
ATCCTGTCTCGCTCTttt
Downstream region at tRNA end position 
aggaaaatat
Secondary structure (Cloverleaf model)
>WENV170215257	Cys	GCA
                   t      Tttt aggaaaatat
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      A G A        A      | | | | |     G
    G       A C C C       A C A G G     C
    G         | | |                 T T
    A       A G G G
      C T A        G     TATTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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