The detailed information of tRNA gene sequence


Sequence ID>WENV170215459
Genome IDCEPX01157352
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 554
End posion on genome 643
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtataataa
tRNA gene sequence 
GGAGAGGTGGCAGAGTCTGGCTTATCGCACTGGTCTTGAAAACCAGCGTGCGGAAACGCA
CCGGGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tactgtatgc
Secondary structure (Cloverleaf model)
>WENV170215459	Ser	TGA
                   a      GCCA tactgtatgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     A
  T         G A C G       G G G G G     C
  G         +   | |                 T T
  G         T C G C
    C T T A        A     CGTGCGGAAACGCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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