The detailed information of tRNA gene sequence


Sequence ID>WENV170215624
Genome IDCEPX01168056
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 261
End posion on genome 187
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tagcttgttt
tRNA gene sequence 
GGGGTCGTAGCTCAATTGGCTAGAGCGTCTCAATGGCATTGAGAAGGTTGTGGGTTCAAG
TCCCATCGACTCCACtt
Downstream region at tRNA end position 
tagggccgtt
Secondary structure (Cloverleaf model)
>WENV170215624	Ala	GGC
                   t      ACtt tagggccgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T A A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTT
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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