The detailed information of tRNA gene sequence


Sequence ID>WENV170215673
Genome IDCEPX01171191
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 348
End posion on genome 275
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gagaaaaaac
tRNA gene sequence 
ATCCTGGTAGCTAAGTGGTTTAAGGCGGTAGGTTGCAACCCTATCATTCGTGAGTTCGAA
TCTCACCCAGGATTtaa
Downstream region at tRNA end position 
attctagcaa
Secondary structure (Cloverleaf model)
>WENV170215673	Cys	GCA
                   c      Ttaa attctagcaa
                     A - T
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        A      | | | | |     G
    G       A T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     CATTC
                    G + T
                    T - A
                    A - T
                    G - C
                    G - C
                  T       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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