The detailed information of tRNA gene sequence


Sequence ID>WENV170216127
Genome IDCEPX01192514
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2444
End posion on genome 2528
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actgttttac
tRNA gene sequence 
GGAAGCGTGGTCGAATGGTAAGGCAGCGGGTTGCTAACCCGTGGCTCGCAAGGGTCTGGG
GGTTCGATTCCCTCCGCTTCCGCCA
Downstream region at tRNA end position 
cgggggagtg
Secondary structure (Cloverleaf model)
>WENV170216127	Ser	GCT
                   c      GCCA cgggggagtg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
        A A        G      | + | | |     G
      T     G C T G       G G G G G     C
      G       | + |                 T T
      G     A G G C
        T A        A     GGCTCGCAAGGGTCT
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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