The detailed information of tRNA gene sequence


Sequence ID>WENV170216269
Genome IDCEPX01194836
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1769
End posion on genome 1678
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accattttaa
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTCGAATGCAGCTGTTTTGAAAGCAGATGGTCTGTGGAAGCAG
TCCCGGGGGTTCGAATCCCTCACCCTCCGCCA
Downstream region at tRNA end position 
atttgtaatg
Secondary structure (Cloverleaf model)
>WENV170216269	Ser	TGA
                   a      GCCA atttgtaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     TGGTCTGTGGAAGCAGTCCC
                    G   A
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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