The detailed information of tRNA gene sequence


Sequence ID>WENV170216327
Genome IDCEPX01195716
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1215
End posion on genome 1139
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggcctaccaa
tRNA gene sequence 
CGGAGTGTGGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAACAGGTCGTAGGTTCGAA
TCCTATCACTCCGACCA
Downstream region at tRNA end position 
gtacaaaaaa
Secondary structure (Cloverleaf model)
>WENV170216327	Pro	TGG
                   a      ACCA gtacaaaaaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T A T C C     A
      C G A        G      + | | | |     G
    T       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    G - C
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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