The detailed information of tRNA gene sequence


Sequence ID>WENV170216335
Genome IDCEPX01195885
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 7127
End posion on genome 7041
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agacggtgtt
tRNA gene sequence 
GCGGGGGTGGCGGAGCGGTCTAACGCGGCAGCCTGCTAAGCTGTTGTCCTTCTGGACGCA
CGGGTTCGAATCCCGTTCCCCGCGCCA
Downstream region at tRNA end position 
ctttttcttt
Secondary structure (Cloverleaf model)
>WENV170216335	Ser	GCT
                   t      GCCA ctttttcttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       G G C G       A C G G G     C
    G         | | |                 T T
    T       A C G C
      C T A        G     TGTCCTTCTGGACGC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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