The detailed information of tRNA gene sequence


Sequence ID>WENV170216557
Genome IDCEPX01198281
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 47588
End posion on genome 47664
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agatttagca
tRNA gene sequence 
GTCGGGGTAGCTCAGTTGGTTAGAGCACGGGACTCATAAACCCGAGGTCGTGAGTTCGAT
TCTCACCCCCGGCACCC
Downstream region at tRNA end position 
aaaacacaaa
Secondary structure (Cloverleaf model)
>WENV170216557	Met	CAT
                   a      ACCC aaaacacaaa
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A C T C     A
      T G A        A      | | | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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