The detailed information of tRNA gene sequence


Sequence ID>WENV170216602
Genome IDCEPX01215423
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 488
End posion on genome 415
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccatcaatta
tRNA gene sequence 
GGTGCAGTAGTTCAATTGGTTAGAGCATCGGCCTGTCACGCCGAAGGTTACGAGTTCAAG
TCTCGTCTGCGCCGttc
Downstream region at tRNA end position 
catgacattt
Secondary structure (Cloverleaf model)
>WENV170216602	Asp	GTC
                   a      Gttc catgacattt
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     T G C T C     A
      T A A        A      | | | | |     A
    T       C T T G       A C G A G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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