The detailed information of tRNA gene sequence


Sequence ID>WENV170216895
Genome IDCEPX01296875
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 202
End posion on genome 272
Amino Acid Stop
Anticodon TTA
Upstream region at tRNA start position 
tgccaccttt
tRNA gene sequence 
GTCCTTATAGTTTAATGGCATGACGACGGAATTTATTTCTGTAAGTGTGAGTTCGATTCT
CGCTGAGGACTtta
Downstream region at tRNA end position 
tgcgtatacg
Secondary structure (Cloverleaf model)
>WENV170216895	Stop	TTA
                   t      Ttta tgcgtatacg
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     T + G
                     A - T          T T
                    T     C G C T C     A
        A A        A      | + | | |     G
      T     T T T G       G T G A G     C
      G       + | |                 T T
      G     T G A C
        C A        G     AAGT
                    A - T
                    C - G
                    G + T
                    G - C
                    A - T
                  A       T
                  T       T
                    T T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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