The detailed information of tRNA gene sequence


Sequence ID>WENV170217084
Genome IDCEPX01342581
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 218
End posion on genome 307
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtaaagtat
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGACGATTGGTACGGTCTTGAAAACCGTTGTACCCGAAAGGGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
accaaaaagc
Secondary structure (Cloverleaf model)
>WENV170217084	Ser	TGA
                   t      GCCA accaaaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C C       G G G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        T     TGTACCCGAAAGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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