The detailed information of tRNA gene sequence


Sequence ID>WENV170217089
Genome IDCEPX01343819
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 361
End posion on genome 436
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaacaaatt
tRNA gene sequence 
TGCGGGTAAGAGTATCGGTATGCTCGGTTGTTTCATAAGCAACAGGTAGTTGGTTCGACT
CCAGCACCCGCAACCA
Downstream region at tRNA end position 
tttttccata
Secondary structure (Cloverleaf model)
>WENV170217089	Met	CAT
                   t      ACCA tttttccata
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    A     C G A C C     A
      C T A        A      | + | | |     G
    G       T G A G       G T T G G     C
    G       + | | |                 T T
    T       G C T C
      A T          G     AGGTA
                    G - C
                    T - A
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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