The detailed information of tRNA gene sequence


Sequence ID>WENV170217244
Genome IDCEPX01368212
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 226
End posion on genome 133
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattgagtga
tRNA gene sequence 
GGAAGATAGCCGAATGTTGGTTTGTCGGGACGGTCTGCTAAACCGTTTGGTCTGAAATAT
GGCCACGAGGGTTCAATTCCCTTGTCTTCCGCCA
Downstream region at tRNA end position 
gtatgcgcca
Secondary structure (Cloverleaf model)
>WENV170217244	Ser	GCT
                   a      GCCA gtatgcgcca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T + G          T T
                    A     T T C C C     A
    T G T A        G      + | | | |     A
  T         A G C C       G A G G G     C
  G         | | | |                 T T
  G         T C G G
    T T T G        G     TTGGTCTGAAATATGGCCAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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