The detailed information of tRNA gene sequence


Sequence ID>WENV170217355
Genome IDCEPX01382559
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1063
End posion on genome 1136
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctctgtttaT
tRNA gene sequence 
GGGCCTGTCGTATAACGGTTATTATTCTCGGCTGGCAGTCGAGAGATTTGGGTTCGATTC
CCAGCAGGTCCAGat
Downstream region at tRNA end position 
tattnnnnnn
Secondary structure (Cloverleaf model)
>WENV170217355	Ala	GGC
                   T      AGat tattnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     G A C C C     A
      C A A        C      + | | | |     G
    G       T A T G       T T G G G     C
    G         | | +                 T T
    T       T T A T
      T A          T     AGAT
                    C - G
                    T - A
                    C - G
                    G - C
                    G + T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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