The detailed information of tRNA gene sequence


Sequence ID>WENV170217742
Genome IDCEPX01411881
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 478
End posion on genome 563
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttaatcaga
tRNA gene sequence 
GCCGGTGTCGCATAACCTGGTATTGCGCCAGCCTTGAGAGCTGGTGGGCTTGTCCTGTGC
AGGTTCGAATCCTGCCGCCGGCGCTA
Downstream region at tRNA end position 
gacttttata
Secondary structure (Cloverleaf model)
>WENV170217742	Ser	TGA
                   a      GCTA gacttttata
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C G T C C     A
      C A A        C      | | | | |     G
    C       T A C G       G C A G G     C
    T         | | |                 T T
    G       T T G C
      G T A        G     TGGGCTTGTCCTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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