The detailed information of tRNA gene sequence


Sequence ID>WENV170217929
Genome IDCEPX01415168
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 18654
End posion on genome 18729
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccaccagtT
tRNA gene sequence 
GGATACGTAACTCAATTGGTAAGAGTTTTCCGCTCATAACGGAACGGTTGAAGGTTCAAG
TCCTTCCGTATCTATta
Downstream region at tRNA end position 
ctttcataag
Secondary structure (Cloverleaf model)
>WENV170217929	Met	CAT
                   T      ATta ctttcataag
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T
                     C - G
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | | | |     A
    T       C T C A       G A A G G     C
    G       | | | |                 T T
    G       G A G T
      T A A        T     CGGTT
                    T - A
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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