The detailed information of tRNA gene sequence


Sequence ID>W141401161
Genome IDJDSS02000018
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Accumulibacter vicinus sp. SK-01 [JDSS]
Start position on genome 308401
End posion on genome 308326
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttctgccgc
tRNA gene sequence 
AGGGGCATAGCTCAACTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
tccatgtaac
Secondary structure (Cloverleaf model)
>W141401161	Trp	CCA
                   c      GCCA tccatgtaac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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