The detailed information of tRNA gene sequence


Sequence ID>WENV170218841
Genome IDCEPZ01025397
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 486
End posion on genome 409
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcaacccaac
tRNA gene sequence 
GGTCCCATCGTTCAGTCAGGTCTAGGACTCTAGATTGTCAATCTAGCAACATGGGTTCGA
ATCCCATTGGGACCGCCA
Downstream region at tRNA end position 
aggagagttg
Secondary structure (Cloverleaf model)
>WENV170218841	Asp	GTC
                   c      GCCA aggagagttg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T A C C C     A
    C T G A        C      | | | | |     G
  A         C T T G       A T G G G     C
  G         | + | |                 T T
  G         G G A C
    T C T A        T     CAAC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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