The detailed information of tRNA gene sequence


Sequence ID>WENV170218910
Genome IDCEPZ01028437
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 638
End posion on genome 709
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcgctttac
tRNA gene sequence 
AGGGGATTCGTATAATGGTAGTATGTCTGCTTCCAATCCAGAAGGTGAGGGTTCGATTCC
TTCATCCCCTGCtt
Downstream region at tRNA end position 
aaaggacaag
Secondary structure (Cloverleaf model)
>WENV170218910	Trp	CCA
                   c      GCtt aaaggacaag
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     C T T C C     A
        A A        C      | | + | |     G
      T     T A T G       G A G G G     C
      G     + | | +                 T T
      G     G T A T
        T A        G     AGGT
                    T - A
                    C - G
                    T - A
                    G - C
                    C   C
                  T       T
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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