The detailed information of tRNA gene sequence


Sequence ID>WENV170219086
Genome IDCEPZ01039579
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2646
End posion on genome 2721
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aatatattaT
tRNA gene sequence 
GGGGCTGTGGTGTAGCTTGGCTAGCATTTCAGGTTTGGGGCCTGAGGACCCCGGTTCAAA
TCCGGGCAGCCCCATtt
Downstream region at tRNA end position 
tttaaaaata
Secondary structure (Cloverleaf model)
>WENV170219086	Pro	TGG
                   T      ATtt tttaaaaata
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
    T C G A        G      | | | | |     A
  T         T G T G       C C C G G     C
  G         + | | +                 T T
  G         G C A T
    C T A          T     GGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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