The detailed information of tRNA gene sequence


Sequence ID>WENV170219145
Genome IDCEPZ01044628
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2627
End posion on genome 2554
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttctattcaa
tRNA gene sequence 
GGGGATGTAGTCCAGTTTGGTTAAGATTCGAGGTTTGGGACTTCGCGACCCCGGTTCAAA
TCCGGGCATCCCCAttc
Downstream region at tRNA end position 
aagggtgcaa
Secondary structure (Cloverleaf model)
>WENV170219145	Pro	TGG
                   a      Attc aagggtgcaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     G G G C C     A
    T T G A        A      | | | | |     A
  T         C C T G       C C C G G     C
  G           | | +                 T T
  G         A G A T
    T T A          T     CGAC
                    C - G
                    G - C
                    A - T
                    G + T
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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