The detailed information of tRNA gene sequence


Sequence ID>WENV170219216
Genome IDCEPZ01049477
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 8411
End posion on genome 8334
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
actcattatt
tRNA gene sequence 
GGGCCCGTTGTCTAGTCTGGTTATGTCGTCGCCTTCACATGGCGAATGTCCCCTGTTCAA
ATCAGGGCGGGCCCACCA
Downstream region at tRNA end position 
cttaaatttt
Secondary structure (Cloverleaf model)
>WENV170219216	Val	CAC
                   t      ACCA cttaaatttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G A C     A
    C T G A        T      | | | | |     A
  T         T C T G       C C C T G     C
  G           |   |                 T T
  G         T G T C
    T T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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